| Term | Note |
| Agate Beach | 444039N/1240338W |
| Bales Creek | 444026N/1234459W |
| Bear Creek | 443517N/1235019W |
| Beaver Creek | 443511N/1235034W |
| "Bend, The" | west side of river across from Oneatta Point. 443458N/1240120W |
| Big Elk Creek | 443717N/1235234N |
| Blind Slough | |
| Boone Slough | 443504N/1235747N |
| Breakwater | |
| Buoy 11 | |
| Buoy 14 | |
| Buoy 15 | |
| Buoy 21 | |
| Buoy 29 | |
| Buoy 39 | |
| Buoy 45 | |
| Buoy 8 | |
| Burpee | 443 624N/1235417W |
| Butler Bridge | USE FOR: Toledo Bridge 443634N/1235602W |
| Center Slough | downriver part of Sally's Bend. 443716N/1240110W |
| Chitwood | 443918N/1234917W |
| CMC Boat | SEE: Oneatta Point |
| Coast Guard Station | |
| Cook Creek | 444047N/1235150W |
| Coquille Point | 443634N/1240032W |
| Craigie Point | 443500N/1235730W |
| Criteser's Dock | |
| Deer Creek | 443347N/1234621W |
| Depoe Bay | |
| Depot Slough | 443655N/1235623W |
| Eddyville | 443805N/1234631W |
| Elk City | 443711N/1235242W |
| Embarcadero Marina | |
| Feagles Creek | 443228N/1234145W |
| Flesher Slough | 443416N/1235905W |
| Grant Creek | 443451N/1240405W |
| Grassy Point | 443422N/1235800W |
| Harlan | 443224N/1234131W |
| Hayes Creek | 443946N/1234753W |
| Idaho Flats | USE FOR: Southbeach mudflats and marine science center flats |
| Idaho Point | USE FOR: Hinton Point 443650N/1240135W |
| Johnson Slough | USE: McCaffery Slough |
| King Slough | 443645N/1240124W |
| Klamath Creek | 444032N/1235106W |
| Lincoln County | |
| Little Elk Creek | 443805N/1234632W |
| Lower Yaquina River | Yaquina to Toledo |
| "Main Channel, West of Yaquina Bay Bridge " | |
| Marine Science Center Dock | Oregon State University. 443710N/1240240W |
| McCaffery Slough | USE FOR: Johnson Slough. 443446N/1240101W |
| McLean Point | 443738N/1240153W |
| Mill Creek | 443533N/1235437W |
| Montgomery Creek | 443520N/1235618W |
| Nashville | 443913N/1233626W |
| North Jetty | 443702N/1240400W |
| Nortons | 443950N/1234203W |
| Nute Slough | 443516N/1235722W |
| Nye Beach | 443833N/1240340W |
| Ollala Creek | 443754N/1235530W |
| Ollala Slough | 443626N/1235542W |
| Oneatta Point | USE FOR: Riverbend. 443511N/1240059W |
| Oregon Aqua-Foods | |
| Oregon Coast Aquarium | |
| Oregon Fish Commission Research Laboratory | |
| Oregon Oyster | USE: Winant |
| Oregon State University Hatfield Marine Science Center | USE FOR: work done inside the center. 443710N/1240240W |
| Otter Rock | 444450N/1240337W |
| Oysterville | 443441N/1240003W |
| Parker Slough | 443526N/1240051W |
| Poole Slough | 443441N/1240029W |
| Port of Newport Dock 1 | "Next to restaurant, discovery tours " |
| Port of Newport Dock 2 | USE FOR: old Ore-aqua or Sause brothers dock |
| Port of Newport Dock 3 | |
| Port of Newport Dock 5 | |
| Port of Newport Dock 7 | |
| Port of Toledo | 443718N/1235614W |
| Port Orford | |
| Public Fishing Pier | |
| River mile 10 | |
| River mile 16 | USE FOR: Charlie's Dock |
| River mile 19 | |
| River mile 5.6 | Fill for the bayside highway? |
| River mile 7 | |
| Riverbend | USE: Oneatta Point |
| Sally's Bend | SEE: Sally's Bend and Center Slough for more specific locations. 443715N/1240040W |
| Sally's Slough | Upriver part of Sally's Bend. 443655N/1240043W |
| Salmon Creek | 443658N/1234400W |
| Sawyer's Landing | |
| Simpson Creek | 443051N/1240242W |
| South Beach | USE FOR: actual beach area |
| South Beach State Park | 443615N/1240345W |
| South Jetty | 443653N/1240349W |
| South Reef | 443611N/1240514W |
| Spout Creek | 443222N/1234138W |
| Stony Creek | 444009N/1234218W |
| Summit | 443817N/1233439W |
| Thornton Creek | 443928N/1235019W |
| Toledo | 443718N/1235614W |
| Toledo Airport | USE FOR Toledo public boat launch. 443600N/1235615W |
| Trapp Creek | 443911N/1235029W |
| Undersea Gardens | |
| Upper Yaquina River | Toledo to head of tide |
| Valsetz | 445018N/1233914W |
| Weiser Point | 443543N/1240038W |
| Wildcat Creek | 444725N/1234834W |
| Winant | USE FOR Oregon Oyster. 443501N/1240004W |
| Wolf Creek | 443324N/1234343W |
| Wright Creek | 443330N/1235849W |
| Yaquina Bay Bar | |
| Yaquina Bay Bridge | 443714N/124021W |
| Yaquina Bay Marine Laboratory | |
| Yaquina City | 443608N/1240027W |
| Yaquina Hatchery | |
| Yaquina Head | 444031N/1240431W |
| Yaquina Marina | |
| Yaquina Reef | |
| Yaquina River | Yaquina City to head of tide. 443645N/1240100W |
| Yaquina River Basin | |
| Yaquina River Bridge | Use for River mile 21.5 |